{ "_id": "6a1075b2acfb0bcc41cac8e3", "Package": "qtl", "Version": "1.75-1", "Date": "2026-03-18", "Title": "Tools for Analyzing QTL Experiments", "Author": "Karl W Broman [aut, cre]\n(), Hao Wu [aut], Gary\nChurchill [ctb] (),\nSaunak Sen [ctb] (),\nDanny Arends [ctb] (),\nRobert Corty [ctb], Timothee Flutre [ctb], Ritsert Jansen\n[ctb], Pjotr Prins [ctb]\n(), Lars Ronnegard\n[ctb], Rohan Shah [ctb], Laura Shannon [ctb], Quoc Tran [ctb],\nAaron Wolen [ctb], Brian Yandell [ctb]\n(), R Core Team [ctb]", "Authors@R": "c(person(given = c(\"Karl\", \"W\"),\nfamily = \"Broman\",\nrole = c(\"aut\", \"cre\"),\nemail = \"broman@wisc.edu\",\ncomment=c(ORCID = \"0000-0002-4914-6671\")),\nperson(given = \"Hao\",\nfamily = \"Wu\",\nrole = \"aut\"),\nperson(given = c(\"Gary\"),\nfamily = \"Churchill\",\nrole = \"ctb\",\ncomment=c(ORCID = \"0000-0001-9190-9284\")),\nperson(given = \"Saunak\",\nfamily = \"Sen\",\nrole = \"ctb\",\ncomment=c(ORCID = \"0000-0003-4519-6361\")),\nperson(given = \"Danny\",\nfamily = \"Arends\",\nrole = \"ctb\",\ncomment=c(ORCID = \"0000-0001-8738-0162\")),\nperson(given = \"Robert\",\nfamily = \"Corty\",\nrole = \"ctb\"),\nperson(given = \"Timothee\",\nfamily = \"Flutre\",\nrole = \"ctb\"),\nperson(given = \"Ritsert\",\nfamily = \"Jansen\",\nrole = \"ctb\"),\nperson(given = \"Pjotr\",\nfamily = \"Prins\",\nrole = \"ctb\",\ncomment=c(ORCID = \"0000-0002-8021-9162\")),\nperson(given = \"Lars\",\nfamily = \"Ronnegard\",\nrole = \"ctb\"),\nperson(given = \"Rohan\",\nfamily = \"Shah\",\nrole = \"ctb\"),\nperson(given = \"Laura\",\nfamily = \"Shannon\",\nrole = \"ctb\"),\nperson(given = \"Quoc\",\nfamily = \"Tran\",\nrole = \"ctb\"),\nperson(given = \"Aaron\",\nfamily = \"Wolen\",\nrole = \"ctb\"),\nperson(given = \"Brian\",\nfamily = \"Yandell\",\nrole = \"ctb\",\ncomment=c(ORCID = \"0000-0002-8774-9377\")),\nperson(\"R Core Team\",\nrole = \"ctb\"))", "Maintainer": "Karl W Broman ", "Description": "Analysis of experimental crosses to identify genes (called\nquantitative trait loci, QTLs) contributing to variation in\nquantitative traits. Broman et al. (2003)\n.", "Copyright": "Code for Brent's method for finding the root of a univariate\nfunction was taken from R 2.15.1 (Copyright 1999, 2001 The R\nCore Team)", "License": "GPL-3", "URL": "https://rqtl.org, https://github.com/kbroman/qtl", "BugReports": "https://github.com/kbroman/qtl/issues", "Encoding": "UTF-8", "ByteCompile": "true", "Repository": "https://kbroman.r-universe.dev", "Date/Publication": "2026-05-06 21:45:45 UTC", "RemoteUrl": "https://github.com/kbroman/qtl", "RemoteRef": "HEAD", "RemoteSha": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-05-06 22:47:46 UTC", "User": "root" }, "MD5sum": "31631064bf3ccccd764b7a60c00ca9e9", "_user": "kbroman", "_type": "src", "_file": "qtl_1.75-1.tar.gz", "_fileid": "c988a4aa3deb30d6c7261c17d710f6d1477d3d0020305db0df9b7c7c321e81de", "_filesize": 5781775, "_sha256": "c988a4aa3deb30d6c7261c17d710f6d1477d3d0020305db0df9b7c7c321e81de", "_created": "2026-05-06T22:47:46.000Z", "_published": "2026-05-22T15:26:42.290Z", "_distro": "noble", "_jobs": [ { "job": 77410439256, "time": 218, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "6843208656" }, { "job": 77410439466, "time": 238, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "6843213386" }, { "job": 77410439965, "time": 255, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "6843216852" }, { "job": 77410439797, "time": 228, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6843212463" }, { "job": 77410439697, "time": 157, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "6843195215" }, { "job": 77410439563, "time": 433, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "6843258206" }, { "job": 77410439286, "time": 183, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "6843200941" }, { "job": 77410439268, "time": 351, "config": "macos-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6843239611" }, { "job": 77410438422, "time": 253, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6843158135" }, { "job": 77410438505, "time": 107, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7164215215" }, { "job": 77410439512, "time": 350, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "6843239111" }, { "job": 77410439359, "time": 277, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "6843222299" }, { "job": 77410439485, "time": 248, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "6843215664" } ], "_buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/kbroman/qtl", "_commit": { "id": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "author": "Karl Broman ", "committer": "Karl Broman ", "message": "Reorder the badges\n", "time": 1778103945 }, "_maintainer": { "name": "Karl W Broman", "email": "broman@wisc.edu", "login": "kbroman", "mastodon": "@kbroman@rstats.me", "orcid": "0000-0002-4914-6671", "uuid": 53972 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.14.0", "role": "Depends" }, { "package": "parallel", "role": "Imports" }, { "package": "graphics", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "grDevices", "role": "Imports" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "kbroman", "_selfowned": true, "_usedby": 25, "_updates": [ { "week": "2025-47", "n": 4 }, { "week": "2025-50", "n": 2 }, { "week": "2026-12", "n": 1 }, { "week": "2026-19", "n": 2 } ], "_tags": [ { "name": "1.72", "date": "2025-11-19" }, { "name": "1.74", "date": "2025-12-08" } ], "_stars": 86, "_contributors": [ { "user": "kbroman", "count": 1457, "uuid": 53972 }, { "user": "dannyarends", "count": 886, "uuid": 47902 }, { "user": "pjotrp", "count": 512, "uuid": 13551 }, { "user": "byandell", "count": 31, "uuid": 325732 }, { "user": "aaronwolen", "count": 26, "uuid": 1067915 }, { "user": "rcorty", "count": 7, "uuid": 718555 }, { "user": "quoctran", "count": 4, "uuid": 1715612 }, { "user": "timflutre-perso", "count": 2, "uuid": 28573133 }, { "user": "alexwhan", "count": 1, "uuid": 3531132 } ], "_userbio": { "uuid": 53972, "type": "user", "name": "Karl Broman", "description": "Professor in Dept of Biostatistics & Medical Informatics at UW–Madison. Applied statistician working on statistical genomics.\r\n" }, "_downloads": { "count": 5967, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/qtl" }, "_mentions": 86, "_devurl": "https://github.com/kbroman/qtl", "_searchresults": 2512, "_topics": [ "openblas" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/qtl.html", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/kbroman/qtl", "_realowner": "kbroman", "_cranurl": true, "_releases": [ { "version": "0.85-4", "date": "2001-10-30" }, { "version": "0.92-3", "date": "2002-02-12" }, { "version": "0.96-5", "date": "2002-09-30" }, { "version": "0.97-21", "date": "2003-06-20" }, { "version": "0.97-22", "date": "2004-01-02" }, { "version": "0.98-57", "date": "2004-09-12" }, { "version": "0.99-22", "date": "2005-04-26" }, { "version": "0.99-24", "date": "2005-04-27" }, { "version": "1.00-15", "date": "2005-09-03" }, { "version": "1.00-16", "date": "2005-09-04" }, { "version": "1.00-17", "date": "2005-09-07" }, { "version": "1.01-9", "date": "2005-10-25" }, { "version": "1.02-26", "date": "2006-06-08" }, { "version": "1.03-14", "date": "2006-07-21" }, { "version": "1.04-52", "date": "2006-10-28" }, { "version": "1.04-53", "date": "2006-10-29" }, { "version": "1.05-2", "date": "2006-11-09" }, { "version": "1.06-43", "date": "2007-08-09" }, { "version": "1.07-11", "date": "2007-09-21" }, { "version": "1.07-12", "date": "2007-10-09" }, { "version": "1.08-55", "date": "2008-04-03" }, { "version": "1.08-56", "date": "2008-04-09" }, { "version": "1.09-43", "date": "2008-07-20" }, { "version": "1.10-27", "date": "2009-01-11" }, { "version": "1.11-12", "date": "2009-03-29" }, { "version": "1.12-26", "date": "2009-07-01" }, { "version": "1.13-7", "date": "2009-09-10" }, { "version": "1.14-2", "date": "2009-10-01" }, { "version": "1.15-15", "date": "2010-05-02" }, { "version": "1.16-4", "date": "2010-05-16" }, { "version": "1.16-6", "date": "2010-05-25" }, { "version": "1.17-39", "date": "2010-07-29" }, { "version": "1.18-7", "date": "2010-08-18" }, { "version": "1.19-20", "date": "2010-11-30" }, { "version": "1.20-15", "date": "2011-02-23" }, { "version": "1.21-2", "date": "2011-03-21" }, { "version": "1.22-21", "date": "2011-11-29" }, { "version": "1.23-16", "date": "2012-03-06" }, { "version": "1.24-9", "date": "2012-05-25" }, { "version": "1.25-15", "date": "2012-08-14" }, { "version": "1.26-13", "date": "2012-11-27" }, { "version": "1.26-14", "date": "2012-11-27" }, { "version": "1.27-10", "date": "2013-04-11" }, { "version": "1.28-19", "date": "2013-09-23" }, { "version": "1.29-2", "date": "2013-12-09" }, { "version": "1.30-4", "date": "2014-02-10" }, { "version": "1.31-9", "date": "2014-03-20" }, { "version": "1.32-10", "date": "2014-05-29" }, { "version": "1.33-7", "date": "2014-08-12" }, { "version": "1.34-16", "date": "2014-10-29" }, { "version": "1.34-17", "date": "2014-10-30" }, { "version": "1.35-1", "date": "2014-12-12" }, { "version": "1.35-3", "date": "2014-12-15" }, { "version": "1.36-6", "date": "2015-03-05" }, { "version": "1.37-11", "date": "2015-08-25" }, { "version": "1.38-4", "date": "2015-12-03" }, { "version": "1.39-5", "date": "2016-03-04" }, { "version": "1.40-8", "date": "2016-11-05" }, { "version": "1.41-6", "date": "2017-06-12" }, { "version": "1.42-7", "date": "2018-02-18" }, { "version": "1.42-8", "date": "2018-02-19" }, { "version": "1.44-9", "date": "2019-01-22" }, { "version": "1.45-11", "date": "2020-02-02" }, { "version": "1.46-2", "date": "2020-03-12" }, { "version": "1.47-9", "date": "2021-01-07" }, { "version": "1.48-1", "date": "2021-03-27" }, { "version": "1.50", "date": "2021-10-06" }, { "version": "1.52", "date": "2022-07-09" }, { "version": "1.54", "date": "2022-12-02" }, { "version": "1.58", "date": "2023-01-07" }, { "version": "1.60", "date": "2023-04-18" }, { "version": "1.62", "date": "2023-11-17" }, { "version": "1.66", "date": "2023-11-28" }, { "version": "1.70", "date": "2024-08-22" }, { "version": "1.72", "date": "2025-11-19" }, { "version": "1.74", "date": "2025-12-11" } ], "_exports": [ "add.cim.covar", "add.threshold", "addcovarint", "addint", "addloctocross", "addmarker", "addmarkerstointervalmap", "addpair", "addqtl", "addtoqtl", "allchrsplits", "argmax.geno", "bayesint", "calc.errorlod", "calc.genoprob", "calc.penalties", "calc.plod", "checkAlleles", "checkcovar", "checkformula", "checkStepwiseqtlStart", "chrlen", "chrnames", "cim", "clean", "cleanGeno", "comparecrosses", "comparegeno", "compareorder", "condense", "convert", "convert2bcsft", "convert2riself", "convert2risib", "convert2sa", "countqtlterms", "countXO", "create.map", "deparseQTLformula", "drop.dupmarkers", "drop.markers", "drop.nullmarkers", "dropfromqtl", "droponemarker", "effectplot", "effectscan", "est.map", "est.rf", "fill.geno", "find_large_intervals", "find.flanking", "find.marker", "find.markerindex", "find.markerpos", "find.pheno", "find.pseudomarker", "find.pseudomarkerpos", "findDupMarkers", "fitqtl", "fitqtlengine", "fitstahl", "flip.order", "flipcross", "formLinkageGroups", "formMarkerCovar", "genAllPartitions", "geno.crosstab", "geno.image", "geno.table", "getgenonames", "getid", "getsex", "groupclusteredheatmap", "imf.cf", "imf.h", "imf.k", "imf.m", "imf.stahl", "inferFounderHap", "inferredpartitions", "interpPositions", "jittermap", "locatemarker", "locateXO", "lodint", "makeqtl", "map2table", "markerlrt", "markernames", "matchchr", "mf.cf", "mf.h", "mf.k", "mf.m", "mf.stahl", "movemarker", "mqm_version", "mqmaugment", "mqmautocofactors", "mqmextractmarkers", "mqmfind.marker", "mqmgetmodel", "mqmpermutation", "mqmplot.circle", "mqmplot.cistrans", "mqmplot.clusteredheatmap", "mqmplot.cofactors", "mqmplot.directedqtl", "mqmplot.heatmap", "mqmplot.multitrait", "mqmplot.permutations", "mqmplot.singletrait", "mqmprocesspermutation", "mqmscan", "mqmscanall", "mqmscanfdr", "mqmsetcofactors", "mqmtestnormal", "nchr", "nind", "nmar", "nmissing", "nphe", "nqrank", "nqtl", "ntyped", "nullmarkers", "orderMarkers", "parseformula", "phenames", "pickMarkerSubset", "plot.map", "plotErrorlod", "plotGeno", "plotInfo", "plotLodProfile", "plotMap", "plotMissing", "plotModel", "plotPheno", "plotPXG", "plotRF", "polyplot", "pull.argmaxgeno", "pull.draws", "pull.geno", "pull.genoprob", "pull.map", "pull.markers", "pull.pheno", "pull.rf", "qtlversion", "read.cross", "readMWril", "reduce2grid", "refineqtl", "reorderqtl", "replace.map", "replacemap", "replaceqtl", "rescalemap", "reviseqtlnuminformula", "reviseXdata", "ripple", "scanall", "scanone", "scanoneboot", "scanonevar", "scanonevar.meanperm", "scanonevar.varperm", "scanPhyloQTL", "scanqtl", "scantwo", "scantwopermhk", "shiftmap", "sim.cross", "sim.geno", "sim.map", "simFounderSnps", "simPhyloQTL", "simulatemissingdata", "stepwiseqtl", "strip.partials", "subrousummaryscantwo", "summary.map", "summaryMap", "summaryScantwoOld", "switch.order", "switchAlleles", "table2map", "top.errorlod", "totmar", "transformPheno", "tryallpositions", "typingGap", "write.cross", "xaxisloc.scanone" ], "_datasets": [ { "name": "badorder", "title": "An intercross with misplaced markers", "object": "badorder", "file": "badorder.RData", "class": [ "f2", "cross" ], "fields": [], "table": false, "tojson": false }, { "name": "bristle3", "title": "Data on bristle number in Drosophila", "object": "bristle3", "file": "bristle3.RData", "class": [ "bc", "cross" ], "fields": [], "table": false, "tojson": false }, { "name": "bristleX", "title": "Data on bristle number in Drosophila", "object": "bristleX", "file": "bristleX.RData", "class": [ "bc", "cross" ], "fields": [], "table": false, "tojson": false }, { "name": "fake.4way", "title": "Simulated data for a 4-way cross", "object": "fake.4way", "file": "fake.4way.RData", "class": [ "4way", "cross" ], "fields": [], "table": false, "tojson": false }, { "name": "fake.bc", "title": "Simulated data for a backcross", "object": "fake.bc", "file": "fake.bc.RData", "class": [ "bc", "cross" ], "fields": [], "table": false, "tojson": false }, { "name": "fake.f2", "title": "Simulated data for an F2 intercross", "object": "fake.f2", "file": "fake.f2.RData", "class": [ "f2", "cross" ], "fields": [], "table": false, "tojson": false }, { "name": "hyper", "title": "Data on hypertension", "object": "hyper", "file": "hyper.RData", "class": [ "bc", "cross" ], "fields": [], "table": false, "tojson": false }, { "name": "listeria", "title": "Data on Listeria monocytogenes susceptibility", "object": "listeria", "file": "listeria.RData", "class": [ "f2", "cross" ], "fields": [], "table": false, "tojson": false }, { "name": "locations", "title": "Genetic locations of traits for the multitrait dataset", "object": "locations", "file": "locations.RData", "class": [ "data.frame" ], "fields": [ "Name", "Chr", "cM" ], "rows": 24, "table": true, "tojson": true }, { "name": "map10", "title": "An example genetic map", "object": "map10", "file": "map10.RData", "class": [ "map" ], "fields": [], "table": false, "tojson": false }, { "name": "mapthis", "title": "Simulated data for illustrating genetic map construction", "object": "mapthis", "file": "mapthis.RData", "class": [ "f2", "cross" ], "fields": [], "table": false, "tojson": false }, { "name": "multitrait", "title": "Example Cross object from R/QTL with multiple traits", "object": "multitrait", "file": "multitrait.RData", "class": [ "riself", "cross" ], "fields": [], "table": false, "tojson": false } ], "_help": [ { "page": "a.starting.point", "title": "Introductory comments on R/qtl", "topics": [ "qtl-package" ] }, { "page": "add.cim.covar", "title": "Indicate marker covariates from composite interval mapping", "topics": [ "add.cim.covar" ] }, { "page": "add.threshold", "title": "Add significance threshold to plot", "topics": [ "add.threshold" ] }, { "page": "addcovarint", "title": "Add QTL x covariate interaction to a multiple-QTL model", "topics": [ "addcovarint" ] }, { "page": "addint", "title": "Add pairwise interaction to a multiple-QTL model", "topics": [ "addint" ] }, { "page": "addloctocross", "title": "Add phenotype location into a cross object", "topics": [ "addloctocross" ] }, { "page": "addmarker", "title": "Add a marker to a cross", "topics": [ "addmarker" ] }, { "page": "addpair", "title": "Scan for an additional pair of QTL in a multiple-QTL model", "topics": [ "addpair" ] }, { "page": "addqtl", "title": "Scan for an additional QTL in a multiple-QTL model", "topics": [ "addqtl" ] }, { "page": "addtoqtl", "title": "Add to a qtl object", "topics": [ "addtoqtl" ] }, { "page": "allchrsplits", "title": "Test all possible splits of a chromosome into two pieces", "topics": [ "allchrsplits" ] }, { "page": "argmax.geno", "title": "Reconstruct underlying genotypes", "topics": [ "argmax.geno" ] }, { "page": "arithscan", "title": "Arithmetic operators for scanone and scantwo results", "topics": [ "+.scanone", "+.scantwo", "-.scanone", "-.scantwo" ] }, { "page": "arithscanperm", "title": "Arithmetic Operators for permutation results", "topics": [ "+.scanoneperm", "+.scantwoperm", "-.scanoneperm", "-.scantwoperm" ] }, { "page": "badorder", "title": "An intercross with misplaced markers", "topics": [ "badorder" ] }, { "page": "bayesint", "title": "Bayesian credible interval", "topics": [ "bayesint" ] }, { "page": "bristle3", "title": "Data on bristle number in Drosophila", "topics": [ "bristle3" ] }, { "page": "bristleX", "title": "Data on bristle number in Drosophila", "topics": [ "bristleX" ] }, { "page": "c.cross", "title": "Combine data for QTL experiments", "topics": [ "c.cross" ] }, { "page": "c.scanone", "title": "Combine columns from multiple scanone results", "topics": [ "c.scanone", "cbind.scanone" ] }, { "page": "c.scanoneperm", "title": "Combine data from scanone permutations", "topics": [ "c.scanoneperm", "rbind.scanoneperm" ] }, { "page": "c.scantwo", "title": "Combine columns from multiple scantwo results", "topics": [ "c.scantwo", "cbind.scantwo" ] }, { "page": "c.scantwoperm", "title": "Combine data from scantwo permutations", "topics": [ "c.scantwoperm", "rbind.scantwoperm" ] }, { "page": "calc.errorlod", "title": "Identify likely genotyping errors", "topics": [ "calc.errorlod" ] }, { "page": "calc.genoprob", "title": "Calculate conditional genotype probabilities", "topics": [ "calc.genoprob" ] }, { "page": "calc.penalties", "title": "Calculate LOD penalties", "topics": [ "calc.penalties" ] }, { "page": "cbind.scanoneperm", "title": "Combine columns from multiple scanone permutation results", "topics": [ "cbind.scanoneperm" ] }, { "page": "cbind.scantwoperm", "title": "Combine scantwo permutations by column", "topics": [ "cbind.scantwoperm" ] }, { "page": "checkAlleles", "title": "Identify markers with switched alleles", "topics": [ "checkAlleles" ] }, { "page": "chrlen", "title": "Chromosome lengths in QTL experiment", "topics": [ "chrlen" ] }, { "page": "chrnames", "title": "Pull out the chromosome names from a cross", "topics": [ "chrnames" ] }, { "page": "cim", "title": "Composite interval mapping", "topics": [ "cim" ] }, { "page": "clean.cross", "title": "Remove derived data", "topics": [ "clean.cross" ] }, { "page": "clean.scantwo", "title": "Clean up scantwo output", "topics": [ "clean.scantwo" ] }, { "page": "cleanGeno", "title": "Delete genotypes that are possibly in error", "topics": [ "cleanGeno" ] }, { "page": "comparecrosses", "title": "Compare two cross objects", "topics": [ "comparecrosses" ] }, { "page": "comparegeno", "title": "Compare individuals' genotype data", "topics": [ "comparegeno" ] }, { "page": "compareorder", "title": "Compare two orderings of markers on a chromosome", "topics": [ "compareorder" ] }, { "page": "condense.scantwo", "title": "Condense the output from a 2-d genome scan", "topics": [ "condense.scantwo" ] }, { "page": "convert.map", "title": "Change map function for a genetic map", "topics": [ "convert.map" ] }, { "page": "convert.scanone", "title": "Convert output from scanone for R/qtl version 0.98", "topics": [ "convert.scanone" ] }, { "page": "convert.scantwo", "title": "Convert output from scantwo for R/qtl version 1.03 and earlier", "topics": [ "convert.scantwo" ] }, { "page": "convert2riself", "title": "Convert a cross to RIL by selfing", "topics": [ "convert2riself" ] }, { "page": "convert2risib", "title": "Convert a cross to RIL by sib mating", "topics": [ "convert2risib" ] }, { "page": "convert2sa", "title": "Convert a sex-specific map to a sex-averaged one", "topics": [ "convert2sa" ] }, { "page": "countXO", "title": "Count number of obligate crossovers for each individual", "topics": [ "countXO" ] }, { "page": "drop.dupmarkers", "title": "Drop duplicate markers", "topics": [ "drop.dupmarkers" ] }, { "page": "drop.markers", "title": "Drop a set of markers", "topics": [ "drop.markers" ] }, { "page": "drop.nullmarkers", "title": "Drop markers without any genotype data", "topics": [ "drop.nullmarkers" ] }, { "page": "dropfromqtl", "title": "Drop a QTL from a qtl object", "topics": [ "dropfromqtl" ] }, { "page": "droponemarker", "title": "Drop one marker at a time and determine effect on genetic map", "topics": [ "droponemarker" ] }, { "page": "effectplot", "title": "Plot phenotype means against genotypes at one or two markers", "topics": [ "effectplot" ] }, { "page": "effectscan", "title": "Plot estimated QTL effects across the whole genome", "topics": [ "effectscan" ] }, { "page": "est.map", "title": "Estimate genetic maps", "topics": [ "est.map" ] }, { "page": "est.rf", "title": "Estimate pairwise recombination fractions", "topics": [ "est.rf" ] }, { "page": "fake.4way", "title": "Simulated data for a 4-way cross", "topics": [ "fake.4way" ] }, { "page": "fake.bc", "title": "Simulated data for a backcross", "topics": [ "fake.bc" ] }, { "page": "fake.f2", "title": "Simulated data for an F2 intercross", "topics": [ "fake.f2" ] }, { "page": "fill.geno", "title": "Fill holes in genotype data", "topics": [ "fill.geno" ] }, { "page": "find_large_intervals", "title": "Find large intervals in a map", "topics": [ "find_large_intervals" ] }, { "page": "find.flanking", "title": "Find flanking markers for a specified position", "topics": [ "find.flanking" ] }, { "page": "find.marker", "title": "Find marker closest to a specified position", "topics": [ "find.marker" ] }, { "page": "findmarkerindex", "title": "Determine the numeric index for a marker", "topics": [ "find.markerindex" ] }, { "page": "find.markerpos", "title": "Find position of a marker", "topics": [ "find.markerpos" ] }, { "page": "find.pheno", "title": "Find column number for a particular phenotype", "topics": [ "find.pheno" ] }, { "page": "find.pseudomarker", "title": "Find the pseudomarker closest to a specified position", "topics": [ "find.pseudomarker" ] }, { "page": "findDupMarkers", "title": "Find markers with identical genotype data", "topics": [ "findDupMarkers" ] }, { "page": "fitqtl", "title": "Fit a multiple-QTL model", "topics": [ "fitqtl" ] }, { "page": "fitstahl", "title": "Fit Stahl interference model", "topics": [ "fitstahl" ] }, { "page": "flip.order", "title": "Flip the orders of markers on a set of chromosomes", "topics": [ "flip.order" ] }, { "page": "formLinkageGroups", "title": "Partition markers into linkage groups", "topics": [ "formLinkageGroups" ] }, { "page": "formMarkerCovar", "title": "Create matrix of marker covariates for QTL analysis", "topics": [ "formMarkerCovar" ] }, { "page": "geno.crosstab", "title": "Create table of two-locus genotypes", "topics": [ "geno.crosstab" ] }, { "page": "geno.image", "title": "Plot grid of genotype data", "topics": [ "geno.image" ] }, { "page": "geno.table", "title": "Create table of genotype distributions", "topics": [ "geno.table" ] }, { "page": "getid", "title": "Pull out the individual identifiers from a cross", "topics": [ "getid" ] }, { "page": "groupclusteredheatmap", "title": "Retrieving groups of traits after clustering", "topics": [ "groupclusteredheatmap" ] }, { "page": "hyper", "title": "Data on hypertension", "topics": [ "hyper" ] }, { "page": "inferFounderHap", "title": "Crude reconstruction of founder haplotypes in multi-parent RIL", "topics": [ "inferFounderHap" ] }, { "page": "inferredpartitions", "title": "Identify inferred partitions in mapping QTL to a phylogenetic tree", "topics": [ "inferredpartitions" ] }, { "page": "interpPositions", "title": "Interpolate positions from one map to another", "topics": [ "interpPositions" ] }, { "page": "jittermap", "title": "Jitter marker positions in a genetic map", "topics": [ "jittermap" ] }, { "page": "listeria", "title": "Data on Listeria monocytogenes susceptibility", "topics": [ "listeria" ] }, { "page": "locateXO", "title": "Estimate locations of crossovers", "topics": [ "locateXO" ] }, { "page": "locations", "title": "Genetic locations of traits for the multitrait dataset", "topics": [ "locations" ] }, { "page": "lodint", "title": "LOD support interval", "topics": [ "lodint" ] }, { "page": "makeqtl", "title": "Make a qtl object", "topics": [ "makeqtl" ] }, { "page": "map10", "title": "An example genetic map", "topics": [ "map10" ] }, { "page": "map2table", "title": "Convert genetic map from list to table.", "topics": [ "map2table" ] }, { "page": "mapthis", "title": "Simulated data for illustrating genetic map construction", "topics": [ "mapthis" ] }, { "page": "markerlrt", "title": "General likelihood ratio test for association between marker pairs", "topics": [ "markerlrt" ] }, { "page": "markernames", "title": "Pull out the marker names from a cross", "topics": [ "markernames" ] }, { "page": "max.scanone", "title": "Maximum peak in genome scan", "topics": [ "max.scanone" ] }, { "page": "max.scanPhyloQTL", "title": "Maximum peak in genome scan to map a QTL to a phylogenetic tree", "topics": [ "max.scanPhyloQTL" ] }, { "page": "max.scantwo", "title": "Maximum peak in two-dimensional genome scan", "topics": [ "max.scantwo" ] }, { "page": "movemarker", "title": "Move a marker to a new chromosome", "topics": [ "movemarker" ] }, { "page": "MQM", "title": "Introduction to Multiple QTL Model (MQM) mapping", "topics": [ "MQM" ] }, { "page": "mqmaugment", "title": "MQM augmentation", "topics": [ "mqmaugment" ] }, { "page": "mqmautocofactors", "title": "Automatic setting of cofactors, taking marker density into account", "topics": [ "mqmautocofactors" ] }, { "page": "mqmextractmarkers", "title": "MQM marker extraction", "topics": [ "mqmextractmarkers" ] }, { "page": "mqmfind.marker", "title": "Fetch significant markers after permutation analysis", "topics": [ "mqmfind.marker" ] }, { "page": "mqmgetmodel", "title": "Retrieve the QTL model used in mapping from the results of an MQM scan", "topics": [ "mqmgetmodel" ] }, { "page": "mqmpermutation", "title": "Estimate QTL LOD score significance using permutations or simulations", "topics": [ "mqmpermutation" ] }, { "page": "mqmplotcircle", "title": "Circular genome plot for MQM", "topics": [ "mqmplot.circle" ] }, { "page": "mqmplotcistrans", "title": "cis-trans plot", "topics": [ "mqmplot.cistrans" ] }, { "page": "mqmplotclusteredheatmap", "title": "Plot clustered heatmap of MQM scan on multiple phenotypes", "topics": [ "mqmplot.clusteredheatmap" ] }, { "page": "mqmplotcofactors", "title": "Plot cofactors on the genetic map", "topics": [ "mqmplot.cofactors" ] }, { "page": "mqmplotdirectedqtl", "title": "Plot LOD*Effect curves of a multiple-QTL model", "topics": [ "mqmplot.directedqtl" ] }, { "page": "mqmplotheatmap", "title": "Heatmap of a genome of MQM scan on multiple phenotypes", "topics": [ "mqmplot.heatmap" ] }, { "page": "mqmplotmultitrait", "title": "Plot the results from a genomescan using a multiple-QTL model on multiple phenotypes", "topics": [ "mqmplot.multitrait" ] }, { "page": "mqmplotpermutations", "title": "Plot results from mqmpermutation", "topics": [ "mqmplot.permutations" ] }, { "page": "mqmplotsingletrait", "title": "Plot LOD curves of a multiple-QTL model", "topics": [ "mqmplot.singletrait" ] }, { "page": "mqmprocesspermutation", "title": "Convert mqmmulti objects into a scanoneperm object", "topics": [ "mqmprocesspermutation" ] }, { "page": "mqmscan", "title": "Genome scan with a multiple QTL model (MQM)", "topics": [ "mqmscan" ] }, { "page": "mqmscanall", "title": "Parallelized MQM on multiple phenotypes in a cross object", "topics": [ "mqmscanall" ] }, { "page": "mqmscanfdr", "title": "Estimate FDR for multiple trait QTL analysis", "topics": [ "mqmscanfdr" ] }, { "page": "mqmsetcofactors", "title": "Set cofactors at fixed intervals, to be used with MQM", "topics": [ "mqmsetcofactors" ] }, { "page": "mqmtestnormal", "title": "Shapiro normality test used for MQM", "topics": [ "mqmtestnormal" ] }, { "page": "multitrait", "title": "Example Cross object from R/QTL with multiple traits", "topics": [ "multitrait" ] }, { "page": "nchr", "title": "Determine the number of chromosomes", "topics": [ "nchr" ] }, { "page": "nind", "title": "Determine the number of individuals QTL experiment", "topics": [ "nind" ] }, { "page": "nmar", "title": "Determine the numbers of markers on each chromosome", "topics": [ "nmar" ] }, { "page": "nmissing", "title": "Number of missing genotypes", "topics": [ "nmissing" ] }, { "page": "nphe", "title": "Determine the number of phenotypes QTL experiment", "topics": [ "nphe" ] }, { "page": "nqrank", "title": "Transform a vector of quantitative values to the corresponding normal quantiles", "topics": [ "nqrank" ] }, { "page": "nqtl", "title": "Determine the number of QTL in a QTL object", "topics": [ "nqtl" ] }, { "page": "ntyped", "title": "Number of genotypes", "topics": [ "ntyped" ] }, { "page": "nullmarkers", "title": "Identify markers without any genotype data", "topics": [ "nullmarkers" ] }, { "page": "orderMarkers", "title": "Find an initial order for markers within chromosomes", "topics": [ "orderMarkers" ] }, { "page": "phenames", "title": "Pull out the phenotypes names from a cross", "topics": [ "phenames" ] }, { "page": "pickMarkerSubset", "title": "Identify the largest subset of markers that are some distance apart", "topics": [ "pickMarkerSubset" ] }, { "page": "plot.comparegeno", "title": "Plot genotype comparison", "topics": [ "plot.comparegeno" ] }, { "page": "plot.cross", "title": "Plot various features of a cross object", "topics": [ "plot.cross" ] }, { "page": "plot.qtl", "title": "Plot QTL locations", "topics": [ "plot.qtl" ] }, { "page": "plot.rfmatrix", "title": "Plot recombination fractions or LOD scores for a single marker", "topics": [ "plot.rfmatrix" ] }, { "page": "plot.scanone", "title": "Plot LOD curves", "topics": [ "plot.scanone" ] }, { "page": "plot.scanoneboot", "title": "Plot results of bootstrap for QTL position", "topics": [ "plot.scanoneboot" ] }, { "page": "plot.scanoneperm", "title": "Plot permutation results for a single-QTL genome scan", "topics": [ "plot.scanoneperm" ] }, { "page": "plot.scanPhyloQTL", "title": "Plot LOD curves from single-QTL scan to map QTL to a phylogenetic tree", "topics": [ "plot.scanPhyloQTL" ] }, { "page": "plot.scantwo", "title": "Plot LOD scores for a two-dimensional genome scan", "topics": [ "plot.scantwo" ] }, { "page": "plot.scantwoperm", "title": "Plot permutation results for a 2d, 2-QTL genome scan", "topics": [ "plot.scantwoperm" ] }, { "page": "plot.errorlod", "title": "Plot grid of error LOD values", "topics": [ "plotErrorlod" ] }, { "page": "plot.geno", "title": "Plot observed genotypes, flagging likely errors", "topics": [ "plotGeno" ] }, { "page": "plot.info", "title": "Plot the proportion of missing genotype information", "topics": [ "plotInfo" ] }, { "page": "plotLodProfile", "title": "Plot 1-d LOD profiles for a multiple QTL model", "topics": [ "plotLodProfile" ] }, { "page": "plot.map", "title": "Plot genetic map", "topics": [ "plot.map", "plotMap" ] }, { "page": "plot.missing", "title": "Plot grid of missing genotypes", "topics": [ "plotMissing" ] }, { "page": "plotModel", "title": "Plot a QTL model", "topics": [ "plotModel" ] }, { "page": "plot.pheno", "title": "Plot a phenotype distribution", "topics": [ "plotPheno" ] }, { "page": "plot.pxg", "title": "Plot phenotypes versus marker genotypes", "topics": [ "plotPXG" ] }, { "page": "plot.rf", "title": "Plot recombination fractions", "topics": [ "plotRF" ] }, { "page": "pull.argmaxgeno", "title": "Pull out the results of the Viterbi algorithm from a cross", "topics": [ "pull.argmaxgeno" ] }, { "page": "pull.draws", "title": "Pull out the genotype imputations from a cross", "topics": [ "pull.draws" ] }, { "page": "pull.geno", "title": "Pull out the genotype data from a cross", "topics": [ "pull.geno" ] }, { "page": "pull.genoprob", "title": "Pull out the genotype probabilities from a cross", "topics": [ "pull.genoprob" ] }, { "page": "pull.map", "title": "Pull out the genetic map from a cross", "topics": [ "pull.map" ] }, { "page": "pull.markers", "title": "Drop all but a selected set of markers", "topics": [ "pull.markers" ] }, { "page": "pull.pheno", "title": "Pull out phenotype data from a cross", "topics": [ "pull.pheno" ] }, { "page": "pull.rf", "title": "Pull out recombination fractions or LOD scores from a cross object", "topics": [ "pull.rf" ] }, { "page": "qtlversion", "title": "Installed version of R/qtl", "topics": [ "qtlversion" ] }, { "page": "read.cross", "title": "Read data for a QTL experiment", "topics": [ "read.cross" ] }, { "page": "readMWril", "title": "Read data for 4- or 8-way RIL", "topics": [ "readMWril" ] }, { "page": "reduce2grid", "title": "Reduce to a grid of pseudomarkers.", "topics": [ "reduce2grid" ] }, { "page": "refineqtl", "title": "Refine the positions of QTL", "topics": [ "refineqtl" ] }, { "page": "reorderqtl", "title": "Reorder the QTL in a qtl object", "topics": [ "reorderqtl" ] }, { "page": "replace.map", "title": "Replace the genetic map of a cross", "topics": [ "replace.map", "replacemap.cross" ] }, { "page": "replacemap.scanone", "title": "Replace the genetic map in QTL mapping results with an alternate map", "topics": [ "replacemap.scanone" ] }, { "page": "replacemap.scantwo", "title": "Replace the genetic map in QTL mapping results with an alternate map", "topics": [ "replacemap.scantwo" ] }, { "page": "replaceqtl", "title": "Replace a QTL in a qtl object with a different position", "topics": [ "replaceqtl" ] }, { "page": "rescalemap", "title": "Rescale genetic maps", "topics": [ "rescalemap" ] }, { "page": "ripple", "title": "Compare marker orders", "topics": [ "ripple" ] }, { "page": "scanone", "title": "Genome scan with a single QTL model", "topics": [ "scanone" ] }, { "page": "scanoneboot", "title": "Bootstrap to get interval estimate of QTL location", "topics": [ "scanoneboot" ] }, { "page": "scanonevar", "title": "Genome scan for QTL affecting mean and/or variance", "topics": [ "scanonevar" ] }, { "page": "scanonevar.meanperm", "title": "Permutation test for mean effect in scanonevar", "topics": [ "scanonevar.meanperm" ] }, { "page": "scanonevar.varperm", "title": "Permutation test for variance effect in scanonevar", "topics": [ "scanonevar.varperm" ] }, { "page": "scanPhyloQTL", "title": "Single-QTL genome scan to map QTL to a phylogenetic tree", "topics": [ "scanPhyloQTL" ] }, { "page": "scanqtl", "title": "General QTL scan", "topics": [ "scanqtl" ] }, { "page": "scantwo", "title": "Two-dimensional genome scan with a two-QTL model", "topics": [ "scantwo" ] }, { "page": "scantwopermhk", "title": "Permutation test for 2d genome scan by Haley-Knott regression", "topics": [ "scantwopermhk" ] }, { "page": "shiftmap", "title": "Shift starting points in genetic maps", "topics": [ "shiftmap" ] }, { "page": "sim.cross", "title": "Simulate a QTL experiment", "topics": [ "sim.cross" ] }, { "page": "sim.geno", "title": "Simulate genotypes given observed marker data", "topics": [ "sim.geno" ] }, { "page": "sim.map", "title": "Simulate a genetic map", "topics": [ "sim.map" ] }, { "page": "simFounderSnps", "title": "Simulate founder SNPs for a multiple-strain RIL", "topics": [ "simFounderSnps" ] }, { "page": "simPhyloQTL", "title": "Simulate a set of intercrosses for a single diallelic QTL", "topics": [ "simPhyloQTL" ] }, { "page": "simulateMissingData", "title": "Simulates missing genotype data", "topics": [ "simulatemissingdata" ] }, { "page": "stepwiseqtl", "title": "Stepwise selection for multiple QTL", "topics": [ "stepwiseqtl" ] }, { "page": "strip.partials", "title": "Strip partially informative genotypes", "topics": [ "strip.partials" ] }, { "page": "subset.cross", "title": "Subsetting data for QTL experiment", "topics": [ "subset.cross", "[.cross" ] }, { "page": "subset.map", "title": "Subsetting chromosomes for a genetic map", "topics": [ "subset.map", "[.map" ] }, { "page": "subset.scanone", "title": "Subsetting the results of a genome scan", "topics": [ "subset.scanone" ] }, { "page": "subset.scanoneperm", "title": "Subsetting permutation test results", "topics": [ "subset.scanoneperm", "[.scanoneperm" ] }, { "page": "subset.scantwo", "title": "Subsetting the results of a 2-d genome scan", "topics": [ "subset.scantwo" ] }, { "page": "subset.scantwoperm", "title": "Subsetting two-dimensional permutation test results", "topics": [ "subset.scantwoperm", "[.scantwoperm" ] }, { "page": "summary.comparegeno", "title": "Print pairs of individuals with similar genotype data.", "topics": [ "summary.comparegeno" ] }, { "page": "summary.cross", "title": "Print summary of QTL experiment", "topics": [ "summary.cross" ] }, { "page": "summary.fitqtl", "title": "Summary of fit of qtl model", "topics": [ "summary.fitqtl" ] }, { "page": "summary.qtl", "title": "Print summary of a QTL object", "topics": [ "summary.qtl" ] }, { "page": "summary.ripple", "title": "Print summary of ripple results", "topics": [ "summary.ripple" ] }, { "page": "summary.scanone", "title": "Summarize the results of a genome scans", "topics": [ "summary.scanone" ] }, { "page": "summary.scanoneboot", "title": "Bootstrap confidence interval for QTL location", "topics": [ "summary.scanoneboot" ] }, { "page": "summary.scanoneperm", "title": "LOD thresholds from scanone permutation results", "topics": [ "summary.scanoneperm" ] }, { "page": "summary.scanPhyloQTL", "title": "Summarize the results a genome scan to map a QTL to a phylogenetic tree", "topics": [ "summary.scanPhyloQTL" ] }, { "page": "summary.scantwo", "title": "Summarize the results of a two-dimensional genome scan", "topics": [ "summary.scantwo" ] }, { "page": "summary.scantwoperm", "title": "LOD thresholds from scantwo permutation results", "topics": [ "summary.scantwoperm" ] }, { "page": "summary.map", "title": "Print summary of a genetic map", "topics": [ "summary.map", "summaryMap" ] }, { "page": "summary.scantwo.old", "title": "Summarize the results of a two-dimensional genome scan", "topics": [ "summaryScantwoOld" ] }, { "page": "switch.order", "title": "Switch the order of markers on a chromosome", "topics": [ "switch.order" ] }, { "page": "switchAlleles", "title": "Switch alleles at selected markers", "topics": [ "switchAlleles" ] }, { "page": "table2map", "title": "Convert a table of marker positions to a map object.", "topics": [ "table2map" ] }, { "page": "top.errorlod", "title": "List genotypes with large error LOD scores", "topics": [ "top.errorlod" ] }, { "page": "totmar", "title": "Determine the total number of markers", "topics": [ "totmar" ] }, { "page": "transformPheno", "title": "Transformation of the phenotypes in a cross object", "topics": [ "transformPheno" ] }, { "page": "tryallpositions", "title": "Test all possible positions for a marker", "topics": [ "tryallpositions" ] }, { "page": "typingGap", "title": "Maximum distance between genotyped markers", "topics": [ "typingGap" ] }, { "page": "write.cross", "title": "Write data for a QTL experiment to a file", "topics": [ "write.cross" ] }, { "page": "xaxisloc.scanone", "title": "Get x-axis locations in scanone plot", "topics": [ "xaxisloc.scanone" ] } ], "_readme": "https://github.com/kbroman/qtl/raw/HEAD/README.md", "_rundeps": [], "_sysdeps": [ { "shlib": "liblapack", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libblas", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" } ], "_vignettes": [ { "source": "bcsft.Rnw", "filename": "bcsft.pdf", "title": "Users Guide for New BCsFt Tools for R/qtl", "engine": "utils::Sweave", "headings": [], "created": "2013-02-26 22:28:53", "modified": "2020-12-03 20:20:33", "commits": 4 } ], "_score": 13.189455370200449, "_indexed": true, "_nocasepkg": "qtl", "_universes": [ "kbroman" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.75-1", "date": "2026-05-06T22:50:26.000Z", "distro": "noble", "arch": "aarch64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "c90fa9fa3a9c741a8d78d927d31ec8efa7d21b216c4b5e29be8fb9b60fc657d6", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.7.0", "os": "linux", "version": "1.75-1", "date": "2026-05-06T22:50:30.000Z", "distro": "noble", "arch": "x86_64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "ae7a23e671db561e5e1ceeab3faa6efbd992c18606f6de2d2c39528cb9c0c73f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.6.0", "os": "linux", "version": "1.75-1", "date": "2026-05-06T22:51:03.000Z", "distro": "noble", "arch": "aarch64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "9a1366523d0599219461203f123e1b26896ef4e37de8245a4fe4c737ed966ff1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.6.0", "os": "linux", "version": "1.75-1", "date": "2026-05-06T22:50:32.000Z", "distro": "noble", "arch": "x86_64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "ce6606c2ea0048839c2256ea4821c14462b8974ac69d774c07ffdf80f0518476", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.5.3", "os": "mac", "version": "1.75-1", "date": "2026-05-06T22:50:05.000Z", "arch": "aarch64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "2a60848b774c2465d5df65dd70383a9b699aeaf5e0003729f6287a48b7d427e5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.5.3", "os": "mac", "version": "1.75-1", "date": "2026-05-06T22:51:51.000Z", "arch": "x86_64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "a3bdb5caff160e14071494bef0faca2150d56665fd7d60825883cdbc4e423f71", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.6.0", "os": "mac", "version": "1.75-1", "date": "2026-05-06T22:50:15.000Z", "arch": "aarch64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "3d4dccba9a21ebbd0a02b66435e4072f9dc4d37ec5be2423096672d76ff31847", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.6.0", "os": "mac", "version": "1.75-1", "date": "2026-05-06T22:51:40.000Z", "arch": "x86_64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "9e4a084b3eb57cf17107770558d11d43615cd2e31e64b340db9b048bb6aeed73", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.7.0", "os": "win", "version": "1.75-1", "date": "2026-05-06T22:50:00.000Z", "arch": "x86_64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "245504aaf5b027d933e281e104b871eba931517cb0330166e044538426b683d5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.5.3", "os": "win", "version": "1.75-1", "date": "2026-05-06T22:49:41.000Z", "arch": "x86_64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "d2730942cff859e2393eb32d90715466aa0cff813e9a2d69a416fcf54e3fba4b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.6.0", "os": "win", "version": "1.75-1", "date": "2026-05-06T22:49:40.000Z", "arch": "x86_64", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "c92b8db85a8adafc91ef506d7de940f714a5cac161bdece92d0cfaa058411350", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" }, { "r": "4.6.0", "os": "wasm", "version": "1.75-1", "date": "2026-05-22T15:26:08.000Z", "arch": "emscripten", "commit": "4f7f58fdf17337756a669cb4ffb2601b79eb7cc2", "fileid": "df479c9fe77924895dc5aba2e20f06489e5eaa8c1c1791881a080a61eb6bc8bc", "status": "success", "buildurl": "https://github.com/r-universe/kbroman/actions/runs/25465314761" } ] }