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  "Title": "Simulate Experimental Crosses",
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  "Author": "Karl W Broman [aut, cre]\n(<https://orcid.org/0000-0002-4914-6671>)",
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    "where_het"
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      "title": "Example AIL pedigree",
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      "class": [
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        "mom",
        "dad",
        "sex",
        "generation"
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      "table": true,
      "tojson": true
    },
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      "name": "mouseL_cox",
      "title": "Mouse chromosome lengths",
      "object": "mouseL_cox",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "mouseL_mgi",
      "title": "Mouse chromosome lengths",
      "object": "mouseL_mgi",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
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      "page": "AILped",
      "title": "Example AIL pedigree",
      "topics": [
        "AILped"
      ]
    },
    {
      "page": "calc_Lstar",
      "title": "Calculate adjusted chromosome length for obligate chiasma",
      "topics": [
        "calc_Lstar"
      ]
    },
    {
      "page": "CCcolors",
      "title": "Collaborative Cross colors",
      "topics": [
        "CCcolors"
      ]
    },
    {
      "page": "check_pedigree",
      "title": "Check a pedigree for errors",
      "topics": [
        "check_pedigree"
      ]
    },
    {
      "page": "collapse_do_alleles",
      "title": "Collapse alleles for simulated DO genotypes",
      "topics": [
        "collapse_do_alleles"
      ]
    },
    {
      "page": "convert2geno",
      "title": "Convert continuous allele information into marker genotypes",
      "topics": [
        "convert2geno"
      ]
    },
    {
      "page": "convert2geno_allchr",
      "title": "Convert continuous allele information into marker genotypes for multiple chromosomes",
      "topics": [
        "convert2geno_allchr"
      ]
    },
    {
      "page": "create_parent",
      "title": "Create a parent object",
      "topics": [
        "create_parent"
      ]
    },
    {
      "page": "cross",
      "title": "Cross two individuals",
      "topics": [
        "cross"
      ]
    },
    {
      "page": "get_geno",
      "title": "Get genotype at a single position",
      "topics": [
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    {
      "page": "mouseL_cox",
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      "topics": [
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      "title": "Plot an individual",
      "topics": [
        "plot_ind"
      ]
    },
    {
      "page": "sim_4way_pedigree",
      "title": "Simulate pedigree for 4-way intercross",
      "topics": [
        "sim_4way_pedigree"
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    },
    {
      "page": "sim_ail_pedigree",
      "title": "Simulate AIL pedigree",
      "topics": [
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      ]
    },
    {
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      "title": "Simulate AIL pedigree with fixed n",
      "topics": [
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    },
    {
      "page": "sim_crossovers",
      "title": "Simulate crossover locations using the Stahl model",
      "topics": [
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    },
    {
      "page": "sim_do_pedigree",
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      "topics": [
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