Changes in version 2026-06-05 - Added package logo Changes in version 2024-07-15 - Fixed link in documentation Changes in version 2023-02-19 - Revise CITATION file to use bibentry() rather than citEntry() Changes in version 2022-07-10 - Include in a C file, for an upcoming change in R Changes in version 2021-11-03 - Fixed lineupversion() to handle a case like "0.40". Changes in version 2020-11-16 - Fixed use of class(), for example using inherits(object, "blah") rather than "blah" %in% class(object). - Fixed potential problem in documentation, since plot() has moved from the graphics package to base. - Converted documentation to use markdown Changes in version 2019-03-06 - Fixed a bug in distee() - Fixed test for corbetw2mat(), due to upcoming change in sample(), in R 3.6 Changes in version 2018-03-23 - Add ByteCompile to the DESCRIPTION file Changes in version 2017-05-19 - Small changes to avoid Note about "R_registerRoutines" Changes in version 2015-07-20 - Add a vignette and example data. - calc.locallod can do calculations in parallel Changes in version 2014-05-02 - Convert documentation to use roxygen2 Changes in version 2012-10-25 - Only minor changes Changes in version 2012-10-15 - In plot2dist, make default smoothScatter=FALSE Changes in version 2012-08-14 - Added function combinedist, for combining distance matrices Changes in version 2012-08-08 - Added addcovar and intcovar arguments to calc.locallod. Changes in version 2012-03-02 - Added NAMESPACE. - Revised lineupversion() to use packageVersion(). Changes in version 2011-05-11 - This is a new package to contain tools for lining up two data matrices, to detect and correct sample mix-ups. The key examples are gene expression microarray data on a large set of samples on two tissues, or between genotype and gene expression.