Package: lineup2 0.6

lineup2: Lining Up Two Sets of Measurements

Tools for detecting and correcting sample mix-ups between two sets of measurements, such as between gene expression data on two tissues. This is a revised version of the 'lineup' package, to be more general and not tied to the 'qtl' package.

Authors:Karl W Broman [aut, cre]

lineup2_0.6.tar.gz
lineup2_0.6.zip(r-4.7)lineup2_0.6.zip(r-4.6)lineup2_0.6.zip(r-4.5)
lineup2_0.6.tgz(r-4.6-x86_64)lineup2_0.6.tgz(r-4.6-arm64)lineup2_0.6.tgz(r-4.5-x86_64)lineup2_0.6.tgz(r-4.5-arm64)
lineup2_0.6.tar.gz(r-4.7-arm64)lineup2_0.6.tar.gz(r-4.7-x86_64)lineup2_0.6.tar.gz(r-4.6-arm64)lineup2_0.6.tar.gz(r-4.6-x86_64)
lineup2_0.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
lineup2/json (API)
NEWS

# Install 'lineup2' in R:
install.packages('lineup2', repos = c('https://kbroman.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kbroman/lineup2/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:
  • lineup2ex - Example dataset for lineup2 package

On CRAN:

Conda:

cpp

3.90 score 16 scripts 219 downloads 14 exports 1 dependencies

Last updated from:7e00f9a763. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK147
linux-devel-x86_64OK172
source / vignettesOK289
linux-release-arm64OK150
linux-release-x86_64OK162
macos-release-arm64OK105
macos-release-x86_64OK359
macos-oldrel-arm64OK117
macos-oldrel-x86_64OK291
windows-develOK139
windows-releaseOK138
windows-oldrelOK140
wasm-releaseOK129

Exports:align_matrix_colsalign_matrix_rowscorr_betw_matricesdist_betw_arraysdist_betw_matricesget_2ndbestget_bestget_nonselfget_problemsget_selfhist_self_nonselfplot_samplewhich_2ndbestwhich_best

Dependencies:Rcpp

R/lineup2 User Guide

Rendered fromlineup2.Rmdusingknitr::rmarkdownon May 26 2026.

Last update: 2026-05-26
Started: 2020-10-15