This package is hidden from search results because it is not hosted in the universe of the upstream owner
rqtl. To fix this you can add URL: https://kbroman.r-universe.dev/qtl2cl to the package DESCRIPTION file. See also theR-universe documentation.Package: qtl2cl 0.23-1
qtl2cl: Command-Line Interface for R/qtl2
Support for a command-line interface for R/qtl2.
Authors:
qtl2cl_0.23-1.tar.gz
qtl2cl_0.23-1.zip(r-4.7)qtl2cl_0.23-1.zip(r-4.6)qtl2cl_0.23-1.zip(r-4.5)
qtl2cl_0.23-1.tgz(r-4.6-any)qtl2cl_0.23-1.tgz(r-4.5-any)
qtl2cl_0.23-1.tar.gz(r-4.7-any)qtl2cl_0.23-1.tar.gz(r-4.6-any)
qtl2cl_0.23-1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
qtl2cl/json (API)
NEWS
| # Install 'qtl2cl' in R: |
| install.packages('qtl2cl', repos = c('https://kbroman.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rqtl/qtl2cl/issues
Last updated from:30936c4ea9. Checks:9 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 147 | ||
| source / vignettes | OK | 199 | ||
| linux-release-x86_64 | OK | 147 | ||
| macos-release-arm64 | OK | 99 | ||
| macos-oldrel-arm64 | OK | 94 | ||
| windows-devel | OK | 125 | ||
| windows-release | OK | 94 | ||
| windows-oldrel | OK | 84 | ||
| wasm-release | OK | 119 |
Exports:cross2rdsread_filerun_calcgenoprobrun_calckinshiprun_getXcovarrun_gp2aprun_scan1
Dependencies:bitbit64blobcachemclicpp11data.tableDBIfastmapgluejsonlitelifecyclememoiseoptparsepkgconfigqtlqtl2qtl2convertRcppRcppEigenrlangRSQLitevctrsyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Read cross and save as rds | cross2rds |
| Read a file | read_file |
| Run calc_genoprob and save result to rds | run_calcgenoprob |
| Calculate kinship matrix | run_calckinship |
| Get X covariates and write to file | run_getXcovar |
| Run genoprob_to_alleleprob | run_gp2ap |
| Run scan1 | run_scan1 |
