NEWS

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simcross 0.10 (2026-06-09)

Minor changes

• Revise CCcolors() to match the color palettes in R/qtl2.

• In plot_crosslines(), lwd is applied to points() as well as arrows() and segments().

simcross 0.8 (2026-05-01)

Minor changes

• Make default color in plot_crosslines() to be "black" rather than "white". Not sure why "white" was the default, as then they can't be seen in the examples.

simcross 0.6 (2023-11-29)

Minor changes

• cross-list some help files

simcross 0.3-6 (2020-09-24)

Minor changes

• Prepare to post to CRAN

simcross 0.2-32

Bug fixes

• Insert missing match.arg() calls in sim_do_pedigree() and sim_dof1_pedigree().

simcross 0.2-31

Minor changes

• Convert Roxygen documentation to Markdown

simcross 0.2-30

Minor changes

• Added dataset, mouseL_cox and mouseL_mgi, with mouse chromosome lengths in cM.

• collapse_do_alleles() now removes any redudant crossovers (adjacent alleles that are the same.

• In C++, avoid calling runif() with n=0, and require Rcpp 0.12.17 (regarding handling of random number generation)

• Byte-compile the R code

simcross 0.2-25

New features

• Added palette argument to CCcolors(). Default is to return my revised CC colors. CCcolors("orig") gives the original, official colors.

• The chrlength argument for plot_ind() can be a vector of length 2, in which case the two chromosomes will be different lengths but aligned at the top. This is to allow illustratation of the X and Y chromosomes in males.

simcross 0.2-22

New features

• Revised sim_ril_pedigree to work for 2^n-way RIL for any n>0.