Package: xoiGBS 0.1.9

xoiGBS: Analyze Recombination and Crossover Interference with Sequence-Based Genotypes

Analyze recombination and crossover interference from genotyping-by-sequencing (GBS) data on a backcross.

Authors:Karl W Broman [aut, cre]

xoiGBS_0.1.9.tar.gz
xoiGBS_0.1.9.zip(r-4.7-x86_64)xoiGBS_0.1.9.zip(r-4.7-arm64)xoiGBS_0.1.9.zip(r-4.6-x86_64)xoiGBS_0.1.9.zip(r-4.6-arm64)xoiGBS_0.1.9.zip(r-4.5-x86_64)
xoiGBS_0.1.9.tgz(r-4.6-x86_64)xoiGBS_0.1.9.tgz(r-4.6-arm64)xoiGBS_0.1.9.tgz(r-4.5-x86_64)xoiGBS_0.1.9.tgz(r-4.5-arm64)
xoiGBS_0.1.9.tar.gz(r-4.7-arm64)xoiGBS_0.1.9.tar.gz(r-4.7-x86_64)xoiGBS_0.1.9.tar.gz(r-4.6-arm64)xoiGBS_0.1.9.tar.gz(r-4.6-x86_64)
xoiGBS_0.1.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
xoiGBS/json (API)

# Install 'xoiGBS' in R:
install.packages('xoiGBS', repos = c('https://kbroman.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kbroman/xoigbs/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

cpp

2.60 score 1 stars 10 exports 5 dependencies

Last updated from:bbd3b82180. Checks:13 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64NOTE111
linux-devel-x86_64NOTE164
source / vignettesOK189
linux-release-arm64NOTE105
linux-release-x86_64NOTE129
macos-release-arm64NOTE99
macos-release-x86_64NOTE186
macos-oldrel-arm64NOTE136
macos-oldrel-x86_64NOTE209
windows-devel-arm64NOTE210
windows-devel-x86_64NOTE144
windows-release-arm64NOTE288
windows-release-x86_64NOTE114
windows-oldrel-x86_64NOTE103
wasm-releaseOK106

Exports:calc_genoprob_gbsgrab2XOgrabXOinferXOlocorder_idsrandXOlocread_countsreorg_countssort_idstrimXO

Dependencies:data.tableR.methodsS3R.ooR.utilsRcpp